Difference between revisions of "BGQ OpenFOAM"

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Line 19: Line 19:
 
# Setup OpenFOAM environment
 
# Setup OpenFOAM environment
 
source $SCINET_OPENFOAM/setup_gcc.sh
 
source $SCINET_OPENFOAM/setup_gcc.sh
 +
 +
# Run from scratch space
 +
cd $SCRATCH/
  
 
# Launch BGQ jobs using runjob
 
# Launch BGQ jobs using runjob
runjob --np 1024 --ranks-per-node=16 --env-all --cwd=$SCRATCH/ : $FOAM_APPBIN/icofoam
+
#
 +
runjob --np 1024 --ranks-per-node=16 --env-all : $FOAM_APPBIN/blockMesh
 +
runjob --np 1024 --ranks-per-node=16 --env-all : $FOAM_APPBIN/icoFoam
 
</pre>
 
</pre>

Revision as of 11:22, 4 July 2013

Sample script for running OpenFOAM on BGQ

#!/bin/sh
# @ job_name           = bgsample
# @ job_type           = bluegene
# @ comment            = "BGQ Job By Size"
# @ error              = $(job_name).$(Host).$(jobid).err
# @ output             = $(job_name).$(Host).$(jobid).out
# @ bg_size            = 64
# @ wall_clock_limit   = 30:00
# @ bg_connectivity    = Torus
# @ queue 

# Load OpenFOAM modules
module load binutils/2.23 bgqgcc/4.8.1 mpich2/gcc-4.8.1 OpenFOAM

# Setup OpenFOAM environment
source $SCINET_OPENFOAM/setup_gcc.sh

# Run from scratch space
cd $SCRATCH/

# Launch BGQ jobs using runjob
# 
runjob --np 1024 --ranks-per-node=16 --env-all : $FOAM_APPBIN/blockMesh
runjob --np 1024 --ranks-per-node=16 --env-all : $FOAM_APPBIN/icoFoam