Difference between revisions of "Hdf5"
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(beginning of HDF5 information page) |
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icc -o test test.c -lhdf5_hl -lhdf5 -limf | icc -o test test.c -lhdf5_hl -lhdf5 -limf | ||
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#or, if you prefer to be explicit, | #or, if you prefer to be explicit, | ||
| + | icc -o test test.c -L${SCINET_HDF5_LIB} -lhdf5_hl -lhdf5 -limf | ||
| − | + | And remember when you run the program that you must have loaded module hdf5/184-p1-v18-serial | |
Revision as of 10:37, 30 September 2010
To compile a serial program that uses HDF5, use module to set your paths correctly, then link the libraries at compile time. In this example, the imaginary test.c uses both the base HDF5 libraries and the newer high-level routines (i.e. it has #include "hdf5.h" and #include "hdf5_hl.h"), so needs libhdf5 and libhdf5_hl:
module purge module load intel hdf5/184-p1-v18-serial
icc -o test test.c -lhdf5_hl -lhdf5 -limf
#or, if you prefer to be explicit,
icc -o test test.c -L${SCINET_HDF5_LIB} -lhdf5_hl -lhdf5 -limf
And remember when you run the program that you must have loaded module hdf5/184-p1-v18-serial