Difference between revisions of "Parallel Scientific Computing - May 2011"
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The goal of the workshop was to enable young researchers already experienced in scientific computing to leave with the knowledge necessary to begin writing the parallel codes needed for their research. The workshop consisted of a mix of lectures and immediate feedback on practical assignments, designed to ensure that students leave with significant experience in both OpenMP and MPI, two of the standards for parallel computing today. GPGPU Programming with Cuda was also briefly introduced. | The goal of the workshop was to enable young researchers already experienced in scientific computing to leave with the knowledge necessary to begin writing the parallel codes needed for their research. The workshop consisted of a mix of lectures and immediate feedback on practical assignments, designed to ensure that students leave with significant experience in both OpenMP and MPI, two of the standards for parallel computing today. GPGPU Programming with Cuda was also briefly introduced. | ||
| − | == | + | ==Lectures== |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Morning_Intro_Parallel/Monday_Morning_Intro_Parallel.mp4 Intro to Class and to Parallel Programming] <br />[[File:MonMorIntro_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Morning_Intro_Parallel/Monday_Morning_Intro_Parallel.mp4]] <br />[[Media:Monday_Morning_Intro_Parallel.pdf|Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Morning_SciNet_Resources/Monday_Morning_SciNet_Resources.mp4 SciNet Resources] <br />[[File:MonMorSN_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Morning_SciNet_Resources/Monday_Morning_SciNet_Resources.mp4]] <br />[[Media:Monday_Morning_SciNet_Resources.pdf|Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Morning_C_Review/Monday_Morning_C_Review.mp4 C Review] <br />[[File:MonMorC_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Morning_C_Review/Monday_Morning_C_Review.mp4]] <br />[[Media:Monday_Morning_C_Review.pdf| Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Afternoon_OpenMP1/Monday_Afternoon_OpenMP1.mp4 Introduction to OpenMP - part 1] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Afternoon_OpenMP2/Monday_Afternoon_OpenMP2.mp4 part 2] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Afternoon_OpenMP3/Monday_Afternoon_OpenMP3.mp4 part 3] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Tuesday_Morning_OpenMP4/Tuesday_Morning_OpenMP4.mp4 part 4] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Tuesday_Morning_OpenMP5/Tuesday_Morning_OpenMP5.mp4 part 5] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Tuesday_Morning_OpenMP6/Tuesday_Morning_OpenMP6.mp4 part 6] <br />[[File:MonAftOMP1_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Afternoon_OpenMP1/Monday_Afternoon_OpenMP1.mp4]] [[File:MonAftOMP2_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse//Monday_Afternoon_OpenMP2/Monday_Afternoon_OpenMP2.mp4]] [[File:MonAftOMP3_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Monday_Afternoon_OpenMP3/Monday_Afternoon_OpenMP3.mp4]] <br/> <br/>[[File:TueMorOMP4_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse//Tuesday_Morning_OpenMP4/Tuesday_Morning_OpenMP4.mp4]] [[File:TueMorOMP5_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse//Tuesday_Morning_OpenMP5/Tuesday_Morning_OpenMP5.mp4]] [[File:TueMorOMP6_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Tuesday_Morning_OpenMP6/Tuesday_Morning_OpenMP6.mp4]] <br />[[Media:Monday_Afternoon_OpenMP1.pdf| Slides of all 6 OpenMP parts]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Tuesday_Afternoon_MPI1/Tuesday_Afternoon_MPI1.mp4 Introduction to MPI - part 1] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Wednesday_Morning_MPI/Wednesday_Morning_MPI.mp4 part 2]<br/>[[File:TueAftMPI1_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Tuesday_Afternoon_MPI1/Tuesday_Afternoon_MPI1.mp4 ]] [[File:WedMorMPI_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Wednesday_Morning_MPI/Wednesday_Morning_MPI.mp4]] <br/> [[Media:MPI.pdf | Slides of both MPI parts]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Wednesday_Afternoon_Hydro/Wednesday_Afternoon_Hydro.mp4 Hydrodynamics]<br/>[[File:WedAftHyd_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Wednesday_Afternoon_Hydro/Wednesday_Afternoon_Hydro.mp4]]<br/> [[Media:Hydro-may2011.pdf | Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Morning_BP_Revision_Control/Thursday_Morning_BP_Revision_Control.mp4 HPC Best Practices and Version Control]<br/>[[File:ThuMorBPR_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Morning_BP_Revision_Control/Thursday_Morning_BP_Revision_Control.mp4]] <br/> [[Media:Snug_techtalk_revcontrol.pdf | Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Morning_Debugging/Thursday_Morning_Debugging.mp4 Parallel Debugging]<br/>[[File:ThuMorDbg_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Morning_Debugging/Thursday_Morning_Debugging.mp4]] <br/> [[Media:Best-practice-debug.pdf | Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Afternoon_Nbody_OpenMP1/Thursday_Afternoon_Nbody_OpenMP1.mp4 N-Body - part 1] [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Afternoon_Nbody_OpenMP2_MPI/Thursday_Afternoon_Nbody_OpenMP2_MPI.mp4 part 2]<br/>[[File:ThuAftNB1_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Afternoon_Nbody_OpenMP1/Thursday_Afternoon_Nbody_OpenMP1.mp4]] [[File:ThuAftNB2_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Thursday_Afternoon_Nbody_OpenMP2_MPI/Thursday_Afternoon_Nbody_OpenMP2_MPI.mp4]] <br/>[[Media:ThurdayAfternoonNbody.pdf | Slides of the OpenMP part]]<br/> [[Media:Nbody-mpi.pdf | Slides of the MPI part]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Friday_Morning_IO/Friday_Morning_IO.mp4 I/O on a Parallel File System]<br/>[[File:FriMorIO.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Friday_Morning_IO/Friday_Morning_IO.mp4]] <br/> [[Media:Snugio.pdf | Slides]] | |
| − | + | # [http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Friday_Morning_GPGPU/Friday_Morning_GPGPU.mp4 Intro to GPGPU Programming] <br/>[[File:FriMorGPU_FirstFrame.png|180px|Click for Video|link=http://support.scinet.utoronto.ca/CourseVideo/PPPcourse/Friday_Morning_GPGPU/Friday_Morning_GPGPU.mp4]]<br/> [[Media:Gpgpu.pdf | Slides]] | |
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==Source Code== | ==Source Code== | ||
*[[Media:Ppp2011code.tgz | Tar-ball of the source code used in class]] | *[[Media:Ppp2011code.tgz | Tar-ball of the source code used in class]] | ||
Latest revision as of 11:01, 3 June 2011
This was an intensive week-long workshop on Scientific Parallel Programming, held at SciNet on the University of Toronto St. George campus.
The goal of the workshop was to enable young researchers already experienced in scientific computing to leave with the knowledge necessary to begin writing the parallel codes needed for their research. The workshop consisted of a mix of lectures and immediate feedback on practical assignments, designed to ensure that students leave with significant experience in both OpenMP and MPI, two of the standards for parallel computing today. GPGPU Programming with Cuda was also briefly introduced.
Lectures
- Intro to Class and to Parallel Programming
Slides - SciNet Resources
Slides - C Review
Slides - Introduction to OpenMP - part 1 part 2 part 3 part 4 part 5 part 6
Slides of all 6 OpenMP parts - Introduction to MPI - part 1 part 2
Slides of both MPI parts - Hydrodynamics
Slides - HPC Best Practices and Version Control
Slides - Parallel Debugging
Slides - N-Body - part 1 part 2
Slides of the OpenMP part
Slides of the MPI part - I/O on a Parallel File System
Slides - Intro to GPGPU Programming
Slides