Difference between revisions of "SciNet TechTalks and Seminars"
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m (moved SNUG TechTalks to SciNet TechTalks and Seminars: Will include the SciNet Developer Seminar series here too.) |
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Tutorials and manuals page]] which is ordered by topic. | Tutorials and manuals page]] which is ordered by topic. | ||
| − | ==Nov 14, 2012== | + | ==Nov 27, 2012: SciNet Bioinformatics Seminar== |
| + | * Sébastien Boisvert and Élénie Godzaridis (Laval)<br/>[[Media:BoisvertGodzaridis-presentation-for-biologists-and-bioinformaticians.pdf|Massively parallel assemblers for massively parallel DNA sequencers]] | ||
| + | |||
| + | ==Nov 26, 2012: SciNet Developer Seminar== | ||
| + | *Élénie Godzaridis, Sébastien Boisvert (Laval)<br/>[[Media:GodzaridisBoisvert-presentation-for-computer-scientists.pdf|Granularities and messages: from design to abstraction to implementation to virtualization]] | ||
| + | |||
| + | ==Nov 14, 2012: SNUG TechTalk== | ||
* Ramses van Zon (SciNet) <br/> [[Media:Tech-talk-gnu-parallel.pdf|GNU Parallel]] | * Ramses van Zon (SciNet) <br/> [[Media:Tech-talk-gnu-parallel.pdf|GNU Parallel]] | ||
| − | == Oct 10, 2012== | + | ==Oct 24, 2012: SciNet Developer Seminar== |
| + | * Mark Ebersole (NVIDIA) <br/> [[Media:SciDevOpenACC.pdf|OpenACC]] | ||
| + | |||
| + | == Oct 10, 2012: SNUG TechTalk== | ||
* Scott Northrup (SciNet) <br/> [[Media:Snug_BGQ.pdf|SciNet BlueGene/Q]] | * Scott Northrup (SciNet) <br/> [[Media:Snug_BGQ.pdf|SciNet BlueGene/Q]] | ||
| − | == Sep 12, 2012== | + | == Oct 3, 2012: SciNet Developer Seminar== |
| + | * Kit Barton (IBM) <br/> [[Media:SciDev-XLCompilers.pdf|Performance Tuning with the IBM XL Compilers]] | ||
| + | |||
| + | == Sep 12, 2012: SNUG TechTalk== | ||
* Jaime Pinto (SciNet) <br/> [[Media:SCIENCEDATA.pdf|Science is Data]] | * Jaime Pinto (SciNet) <br/> [[Media:SCIENCEDATA.pdf|Science is Data]] | ||
| − | ==Jun 13, 2012== | + | ==Jun 13, 2012: SNUG TechTalk== |
* Ramses van Zon (SciNet)<br/> [[Media:Remotescinet.pdf | Remote development on SciNet]] | * Ramses van Zon (SciNet)<br/> [[Media:Remotescinet.pdf | Remote development on SciNet]] | ||
| − | ==May 9, 2012== | + | ==May 9, 2012: SNUG TechTalk== |
* Jonathan Dursi (SciNet)<br/> ADIOS for Parallel IO: [[Media:Adios-techtalk-may2012.pdf|slides]] and [[Media:Adios-techtalk-may2012-src.tgz|source code]] | * Jonathan Dursi (SciNet)<br/> ADIOS for Parallel IO: [[Media:Adios-techtalk-may2012.pdf|slides]] and [[Media:Adios-techtalk-may2012-src.tgz|source code]] | ||
| − | ==Apr 11, 2012== | + | ==Apr 11, 2012: SNUG TechTalk== |
* Scott Northrup (SciNet)<br/> [[Media:Snug_techtalk_Infiniband.pdf | SciNet's Infiniband Network & MPI options]] | * Scott Northrup (SciNet)<br/> [[Media:Snug_techtalk_Infiniband.pdf | SciNet's Infiniband Network & MPI options]] | ||
| − | ==March 14, 2012== | + | ==March 14, 2012: SNUG TechTalk== |
* Ramses van Zon (SciNet)<br/> [[Media:MKLTechTalkMarch2012.pdf | Intel Math Kernel Library]] | * Ramses van Zon (SciNet)<br/> [[Media:MKLTechTalkMarch2012.pdf | Intel Math Kernel Library]] | ||
| − | ==February 8, 2012== | + | ==February 8, 2012: SNUG TechTalk== |
* Jonathan Dursi (SciNet)<br/> [[Media:Mpi-tuning-parameters.pdf | MPI Tuning Parameters]] | * Jonathan Dursi (SciNet)<br/> [[Media:Mpi-tuning-parameters.pdf | MPI Tuning Parameters]] | ||
| − | ==January 11, 2012== | + | ==January 11, 2012: SNUG TechTalk== |
* Chris Neale, Pawel Pomorski, Nilmadhab Chakrabarti, Emil F. Pai, Régis Pomès (Sick Children's Hospital)<br/>Kinetics of Hydrophobic Gating and Energetics of Magnesium Permeation in the Bacterial Divalent Cation Transport System CorA | * Chris Neale, Pawel Pomorski, Nilmadhab Chakrabarti, Emil F. Pai, Régis Pomès (Sick Children's Hospital)<br/>Kinetics of Hydrophobic Gating and Energetics of Magnesium Permeation in the Bacterial Divalent Cation Transport System CorA | ||
| − | ==December 14, 2011== | + | ==December 14, 2011: SNUG TechTalk== |
* Scott Northrup (SciNet)<br/> [[Media:Snug_techtalk_compiler.pdf | Intel Compiler Optimizations]] | * Scott Northrup (SciNet)<br/> [[Media:Snug_techtalk_compiler.pdf | Intel Compiler Optimizations]] | ||
| − | ==November 9, 2011== | + | ==November 9, 2011: SNUG TechTalk== |
* Ramses van Zon (SciNet)<br/>[[Media:Snugtt2.pdf | How to deal with the new file system setup at SciNet]] | * Ramses van Zon (SciNet)<br/>[[Media:Snugtt2.pdf | How to deal with the new file system setup at SciNet]] | ||
| − | ==October 12, 2011== | + | ==October 12, 2011: SNUG TechTalk== |
* Manuel Saldaña (Arch Es Computing)<br/> [[Media:ArchES-MPI-at-scinet2011.pdf | MPI as a programming model for High-Performance Reconfigurable Computers]] | * Manuel Saldaña (Arch Es Computing)<br/> [[Media:ArchES-MPI-at-scinet2011.pdf | MPI as a programming model for High-Performance Reconfigurable Computers]] | ||
| − | ==September 14, 2011== | + | ==September 14, 2011: SNUG TechTalk== |
* Jaime Pinto (SciNet)<br/> [[Media:HPSS_rationale.pdf | HPSS - SciNet's Storage Capacity Expansion]] | * Jaime Pinto (SciNet)<br/> [[Media:HPSS_rationale.pdf | HPSS - SciNet's Storage Capacity Expansion]] | ||
| − | ==June 8, 2011== | + | ==June 8, 2011: SNUG TechTalk== |
* Pierre de Buyl (CPTG Toronto/ULB Brussels)<br/> [http://support.scinet.utoronto.ca/Snug/scinet-f2py/scinet-f2py.html Fortran and Python] | * Pierre de Buyl (CPTG Toronto/ULB Brussels)<br/> [http://support.scinet.utoronto.ca/Snug/scinet-f2py/scinet-f2py.html Fortran and Python] | ||
| − | ==May 4, 2011== | + | ==May 4, 2011: SNUG TechTalk== |
* Peter Colberg (CPTG, Toronto)<br/> [[Media:PeterColberg_Lua_scinet.pdf | Scripting HALMD with Lua and Luabind]] | * Peter Colberg (CPTG, Toronto)<br/> [[Media:PeterColberg_Lua_scinet.pdf | Scripting HALMD with Lua and Luabind]] | ||
| − | ==April 12, 2011== | + | ==April 12, 2011: SNUG TechTalk== |
* Rames van Zon (SciNet)<br/> [[Media:SNUGlocalsetup.pdf | User-Space Modules and Packages on SciNet]] | * Rames van Zon (SciNet)<br/> [[Media:SNUGlocalsetup.pdf | User-Space Modules and Packages on SciNet]] | ||
| − | ==March 9, 2011== | + | ==March 9, 2011: SNUG TechTalks== |
* Abdul Mroue (CITA, Toronto)<br/> [[Media:Mroue_SNUG_March_2011.pdf | Precessing Binary Black Hole Simulations]] | * Abdul Mroue (CITA, Toronto)<br/> [[Media:Mroue_SNUG_March_2011.pdf | Precessing Binary Black Hole Simulations]] | ||
* Joachim Harnois-Déraps (CITA, Toronto)<br/> [[Media:Harnois_SNUG_March_2011.pdf | Weak Gravitational Lensing]] | * Joachim Harnois-Déraps (CITA, Toronto)<br/> [[Media:Harnois_SNUG_March_2011.pdf | Weak Gravitational Lensing]] | ||
| − | ==February 9, 2011== | + | ==February 9, 2011: SNUG TechTalk== |
* Seth Dworkin (Mechanical and Industrial Engineering, UoT)<br/> [[Media:SNUG_seminar_Feb_2011.pps | Computational Combustion: Toward the use of Sustainable and Alternative Fuels]] | * Seth Dworkin (Mechanical and Industrial Engineering, UoT)<br/> [[Media:SNUG_seminar_Feb_2011.pps | Computational Combustion: Toward the use of Sustainable and Alternative Fuels]] | ||
* Ramses van Zon (SciNet)<br/> [[Media:Snugtrackjob.pdf | Job Monitoring on SciNet and Job Efficiency]] | * Ramses van Zon (SciNet)<br/> [[Media:Snugtrackjob.pdf | Job Monitoring on SciNet and Job Efficiency]] | ||
| − | ==January 12, 2011== | + | ==January 12, 2011: SNUG TechTalks== |
* Sarah Rauscher (Regis Pomes group, Sick Kids, Toronto)<br/> [[Media:Rauscher_SNUG_Tech_Talk_Jan_12_2011.pdf | MD Simulations of Biomolecular Systems]] | * Sarah Rauscher (Regis Pomes group, Sick Kids, Toronto)<br/> [[Media:Rauscher_SNUG_Tech_Talk_Jan_12_2011.pdf | MD Simulations of Biomolecular Systems]] | ||
* Bijia Pang (Ue-Li Pen group, CITA, UoT) <br/> [[Media:BPang_SNUG_Tech_Talk_Jan_12_2011.pdf | Black Hole Accretion on 17576 CPUs]] | * Bijia Pang (Ue-Li Pen group, CITA, UoT) <br/> [[Media:BPang_SNUG_Tech_Talk_Jan_12_2011.pdf | Black Hole Accretion on 17576 CPUs]] | ||
| − | ==December 8, 2010== | + | ==December 8, 2010: SNUG TechTalk== |
* Jonathan Dursi (SciNet) <br/>[[Media:ProfillingTechTalk-Dec2010.pdf | Profiling and Tuning]] | * Jonathan Dursi (SciNet) <br/>[[Media:ProfillingTechTalk-Dec2010.pdf | Profiling and Tuning]] | ||
| − | ==November 10, 2010 == | + | ==November 10, 2010: SNUG TechTalk == |
* Ramses van Zon (SciNet)<br/> [[Media:Snugdebug.pdf | Debuggers & Parallel Debugging on SciNet - gdb, ddd, padb]] | * Ramses van Zon (SciNet)<br/> [[Media:Snugdebug.pdf | Debuggers & Parallel Debugging on SciNet - gdb, ddd, padb]] | ||
| − | ==October 13, 2010== | + | ==October 13, 2010: SNUG TechTalk== |
* Scott Northrup (SciNet) <br/>[[Media:Snug_techtalk_revcontrol.pdf|Version Control]] | * Scott Northrup (SciNet) <br/>[[Media:Snug_techtalk_revcontrol.pdf|Version Control]] | ||
| − | ==September 8, 2010== | + | ==September 8, 2010: SNUG TechTalk== |
* Ramses van Zon (SciNet) <br/>[[Media:Snugio.pdf | The Parallel File System and I/O]] | * Ramses van Zon (SciNet) <br/>[[Media:Snugio.pdf | The Parallel File System and I/O]] | ||
Revision as of 17:14, 27 November 2012
The SciNet Users Group (SNUG) meetings are every month on the second Wednesday, and involve pizza, user discussion, feedback, and a TechTalk or two (half-hour talk or two 15 minutes talks) on topics or technologies of interest to the SciNet community.
The pdfs of these TechTalks can be found here on the wiki. Below is a chronological list. Most pdfs can also be found on the Tutorials and manuals page which is ordered by topic.
Nov 27, 2012: SciNet Bioinformatics Seminar
- Sébastien Boisvert and Élénie Godzaridis (Laval)
Massively parallel assemblers for massively parallel DNA sequencers
Nov 26, 2012: SciNet Developer Seminar
- Élénie Godzaridis, Sébastien Boisvert (Laval)
Granularities and messages: from design to abstraction to implementation to virtualization
Nov 14, 2012: SNUG TechTalk
- Ramses van Zon (SciNet)
GNU Parallel
Oct 24, 2012: SciNet Developer Seminar
- Mark Ebersole (NVIDIA)
OpenACC
Oct 10, 2012: SNUG TechTalk
- Scott Northrup (SciNet)
SciNet BlueGene/Q
Oct 3, 2012: SciNet Developer Seminar
- Kit Barton (IBM)
Performance Tuning with the IBM XL Compilers
Sep 12, 2012: SNUG TechTalk
- Jaime Pinto (SciNet)
Science is Data
Jun 13, 2012: SNUG TechTalk
- Ramses van Zon (SciNet)
Remote development on SciNet
May 9, 2012: SNUG TechTalk
- Jonathan Dursi (SciNet)
ADIOS for Parallel IO: slides and source code
Apr 11, 2012: SNUG TechTalk
- Scott Northrup (SciNet)
SciNet's Infiniband Network & MPI options
March 14, 2012: SNUG TechTalk
- Ramses van Zon (SciNet)
Intel Math Kernel Library
February 8, 2012: SNUG TechTalk
- Jonathan Dursi (SciNet)
MPI Tuning Parameters
January 11, 2012: SNUG TechTalk
- Chris Neale, Pawel Pomorski, Nilmadhab Chakrabarti, Emil F. Pai, Régis Pomès (Sick Children's Hospital)
Kinetics of Hydrophobic Gating and Energetics of Magnesium Permeation in the Bacterial Divalent Cation Transport System CorA
December 14, 2011: SNUG TechTalk
- Scott Northrup (SciNet)
Intel Compiler Optimizations
November 9, 2011: SNUG TechTalk
- Ramses van Zon (SciNet)
How to deal with the new file system setup at SciNet
October 12, 2011: SNUG TechTalk
- Manuel Saldaña (Arch Es Computing)
MPI as a programming model for High-Performance Reconfigurable Computers
September 14, 2011: SNUG TechTalk
- Jaime Pinto (SciNet)
HPSS - SciNet's Storage Capacity Expansion
June 8, 2011: SNUG TechTalk
- Pierre de Buyl (CPTG Toronto/ULB Brussels)
Fortran and Python
May 4, 2011: SNUG TechTalk
- Peter Colberg (CPTG, Toronto)
Scripting HALMD with Lua and Luabind
April 12, 2011: SNUG TechTalk
- Rames van Zon (SciNet)
User-Space Modules and Packages on SciNet
March 9, 2011: SNUG TechTalks
- Abdul Mroue (CITA, Toronto)
Precessing Binary Black Hole Simulations - Joachim Harnois-Déraps (CITA, Toronto)
Weak Gravitational Lensing
February 9, 2011: SNUG TechTalk
- Seth Dworkin (Mechanical and Industrial Engineering, UoT)
Computational Combustion: Toward the use of Sustainable and Alternative Fuels - Ramses van Zon (SciNet)
Job Monitoring on SciNet and Job Efficiency
January 12, 2011: SNUG TechTalks
- Sarah Rauscher (Regis Pomes group, Sick Kids, Toronto)
MD Simulations of Biomolecular Systems - Bijia Pang (Ue-Li Pen group, CITA, UoT)
Black Hole Accretion on 17576 CPUs
December 8, 2010: SNUG TechTalk
- Jonathan Dursi (SciNet)
Profiling and Tuning
November 10, 2010: SNUG TechTalk
- Ramses van Zon (SciNet)
Debuggers & Parallel Debugging on SciNet - gdb, ddd, padb
October 13, 2010: SNUG TechTalk
- Scott Northrup (SciNet)
Version Control
September 8, 2010: SNUG TechTalk
- Ramses van Zon (SciNet)
The Parallel File System and I/O